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<h1>Manual</h1>

<table><tr><td>
	<h2>Usage</h2>
	<div><a href='general/screenshots.shtml'>Screenshots</a></div>
	<div><a href='general/news.shtml'>News and open bug reports</a></div>
	<div><a target='new' href='http://neomorph.salk.edu/epigenome/'>Demo site (Salk Institute)</a></div>
	<div><a href='general/demo.shtml'>Demo movie (QuickTime)</a></div>

	<h2>Instances</h2>
	<div><a href='instances/index.shtml'>What is an instance?</a></div>
	<div><a href='instances/proxy.shtml'>Configuring a reverse proxy</a></div>
	<div><a href='instances/create.shtml'>Creating an Anno-J instance</a></div>
	<div><a href='instances/configure.shtml'>Configuring an Anno-J instance</a></div>
	<div><a href='instances/list.shtml'>List of instances</a></div>
</td><td>
	<h2>Services</h2>
	<div><a href='services/index.shtml'>What is a service?</a></div>
	<div><a href='services/data.shtml'>Preparing data</a></div>
	<div><a href='services/syndication.shtml'>Syndication</a></div>
	<div><a href='services/responding.shtml'>Responding to requests</a></div>
	<div><a href='services/conclusion.shtml'>Fetcher example</a></div>
	<div><a href='services/list.shtml'>List of services</a></div>

	<h2>Plugins</h2>
	<div><a href='plugins/index.shtml'>What is a plugin?</a></div>
	<div><a href='plugins/list.shtml'>List of plugins</a></div>
</td><td>
	<h2>Data Types</h2>
	<div><a href='datatypes/index.shtml'>What is a data type?</a></div>
	<div><a href='datatypes/list.shtml'>List of data types</a></div>

	<h2>Styles</h2>
	<div><a href='styles/index.shtml'>What is a style?</a></div>
	<div><a href='styles/list.shtml'>List of CSS assets</a></div>

	<h2>Troubleshooting</h2>
	<div><a href='general/troubleshooting.shtml'>Common problems</a></div>
	<div><a href='general/contact.shtml'>Contact the author</a></div>
</td></tr></table>
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